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[70] Lab Chip, 18, 9, 1320-1329, (2018)

Fully automated, on-site isolation of cfDNA from whole blood for cancer therapy monitoring

Chi-Ju Kim, Juhee Park, Vijaya Sunkara, Tae-Hyeong Kim, Yongjin Lee, Kyusang Lee, Mi-Hyun Kim and Yoon-Kyoung Cho*

Fully integrated lab-on-a-disc for cfDNA isolation allows real-time monitoring of tumor mutation status during targeted therapy.

This article is part of the themed collection: Personalised Medicine: Liquid Biopsy
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[69] Micromachines, 9, 3, 100, (2018)

Liquid Biopsy in Lung Cancer: Clinical Applications of Circulating Biomarkers (CTCs and ctDNA)

Minji Lim+, Chi-Ju Kim+,Vijaya Sunkara , Mi-Hyun Kim and Yoon-Kyoung Cho*

In this review, we examined the clinical significance and uniqueness of CTCs and ctDNA from NSCLC patients, isolation and detection methods developed to analyze each type of circulating biomarker, and examples of clinical studies of potential applications for early diagnosis, prognosis, treatment monitoring, and prediction of resistance to therapy. We also discuss challenges that remain to be addressed before such tools are implemented for routine use in clinical settings.

This article belongs to the Special Issue Microfluidics for Circulating Biomarkers
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[68] PNAS, 115, 1, 14-18, (2018)

Enzyme leaps fuel antichemotaxis

Ah-Young Jee, Sandipan Dutta, Yoon-Kyoung Cho, Tsvi Tlusty, and Steve Granick*

Challenging the traditional view that enzyme kinetics are only a matter of catalyzing chemical reactions, there is mounting evidence that the enzyme catalysis enhances enzyme mobility. This is significant to programming spatio-temporal patterns of molecular response to chemical stimulus, which is common to living matter as well as to significant chemical technology. This paper shows that the enhanced diffusivity of enzymes is a “run-and-tumble” process analogous to that performed by swimming microorganisms, executed in this situation by molecules that lack the decision-making machinery of microorganisms. The result is that enzymes display “antichemotaxis” when they turn over substrate; they migrate in the direction of lesser reactant concentratio

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[67] Sensors and Actuators B: Chemical, 256, 310-317, (2018)

Centrifugal Microfluidic System for a Fully Automated N-fold Serial Dilution

Tae-Hyeong Kim, Chi-Ju Kim, Yubin Kim, Yoon-Kyoung Cho*

N-fold serial dilution with a choice of N = 2, 5, 10 is fully integrated and automated on a centrifugal microfluidic system. Individually addressable, reversible diaphragm valves are utilized to enable the automatic control of the fluidic transfer and metering of the liquid.

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Nobel Symposium 162 - Microfluidics, Stockholm, Sweden; arXiv:1712.08369 [physics.flu-dyn]

Centrifugal Microfluidics for Biomedical Applications

Yoon-Kyoung Cho

The Nobel Foundation's Symposium programme was initiated in 1965 and since then over 160 symposia have taken place. With the Nobel symposium summarized in this proceedings volume, we had the ambition to cover the past, current and future developments of microfluidics; a highly challenging task as there are many excellent researchers in this area and only thirty slots in the program. We tried to cover the early breakthrough contributions to the field, important developments over the years and applications of microfluidics that now propagate in vastly different directions both as industrial components or processes and as tools and methods supporting fundamental research

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[66] Lab Chip 17, 24, 4171 - 4185, (2017)

Cell migration in microengineered tumor environments

Eujin Um+, Jung Min Oh+, Steve Granick, and Yoon-Kyoung Cho*​

This review provides an overview of recent advances in microengineered cell migration platforms in the focus of the cell migration characteristics influenced by complex tumor microenvironment.

Invited Review
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[65] Oncogene, 36, 49, 6823-6829, (2017)

CUT-PCR: CRISPR-mediated, ultrasensitive detection of target DNA using PCR

S H Lee, J Yu, G-H Hwang, S Kim, H S Kim, S Ye, K Kim, J Park, D Y Park, Y-K Cho, J-S Kim, and S Bae*

Here, we developed a novel method, CUT (CRISPR-mediated, Ultrasensitive detection of Target DNA)-PCR, which uses CRISPR endonucleases to enrich and detect the extremely small amounts of tumor DNA fragments among the much more abundant wild-type DNA fragments by specifically eliminating the wild-type sequences.

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[64] PLoS ONE, 12, 6, e0180251, (2017)

Circulating tumor cells detected by lab-on-a-disc: Role in early diagnosis of gastric cancer

Hwa Mi Kang, Gwang Ha Kim*, Hye Kyung Jeon, Dae Hwan Kim, Tae Yong Jeon, Do Youn Park, Hyunjin Jeong, Won Joo Chun, Mi-Hyun Kim, Juhee Park, Minji Lim, Tae-Hyeong Kim, Yoon-Kyung Cho

The use of circulating tumor cells (CTCs) as an early diagnostic biomarker and prognostic indicator after surgery or chemotherapy has been suggested for various cancers. This study aimed to evaluate CTCs in patients who underwent gastrectomy for gastric cancer and to explore their clinical usefulness in the early diagnosis of gastric cancer.

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[63] Scientific Reports, 7, 2050, (2017)

A microfluidic chip for screening individual cancer cells via eavesdropping on autophagy-inducing crosstalk in the stroma niche

Hacer Ezgi Karakas+, Junyoung Kim+, Juhee Park, Jung Min Oh, Yongjun Choi, Devrim Gozuacik* & Yoon-Kyoung Cho*

We could demonstrate real-time monitoring of autophagy induction in fibroblasts by single tumor cells. Retrieval of individual tumor cells from the microfluidic system and their subsequent genomic analysis was possible, allowing us to determine the nature of the factor mediating tumor-stroma interactions.

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[62] ACS Nano, 11, 2, 1360–1370(2017)

Exodisc for Rapid, Size-Selective, and Efficient Isolation and Analysis of Nanoscale Extracellular Vesicles from Biological Samples

Hyun-Kyung Woo, Vijaya Sunkara, Juhee Park, Tae-Hyeong Kim, Ja-Ryoung Han, Chi-Ju Kim, Hyun-Il Choi, Yoon-Keun Kim, and Yoon-Kyoung Cho*

Here, we presented a rapid, label-free, and highly sensitive method for EV isolation and quantification using a lab-ona-disc integrated with two nanofilters (Exodisc). Starting from raw biological samples, such as cell-culture supernatant (CCS) or cancer-patient urine, fully automated enrichment of EVs in the size range of 20 nm to 600 nm was achieved within 30 min using a tabletop-sized centrifugal microfluidic system.

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[61] Anal. Chem., 89, 2, 1155–1162 (2017)

FAST: Size-selective, Clog-free Isolation of Rare Cancer Cells from Whole Blood at a Liquid-liquid Interface

Tae-Hyeong Kim, Minji Lim, Juhee Park, Jung Min Oh, Hyeongeun Kim, Hyunjin Jeong, Sun Ju Lee, Hee Chul Park, Sungmok Jung, Byung Chul Kim, Kyusang Lee, Mi-Hyun Kim, Do Youn Park, Gwang Ha Kim, and Yoon-Kyoung Cho*

In this work, inspired by antifouling membranes with liquid-filled pores in nature, clog-free, highly sensitive (95.9 ± 3.1% recovery rate), selective (>2.5 log depletion of white blood cells), rapid (>3 mL/min), and label-free isolation of viable CTCs from whole blood without prior sample treatment is achieved using a stand-alone lab-on-a-disc system equipped with Fluid Assisted Separation Technology (FAST).

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[60] Lab Chip, 16, 19, 3741-3749(2016)

A lab-on-a-disc with reversible and thermally stable diaphragm valves

Tae-Hyeong Kim, Vijaya Sunkara, Juhee Park, Chi-Ju Kim, Hyun-Kyung Woo and Yoon-Kyoung Cho*

Here, we report on a lab-on-a-disc incorporating individually addressable diaphragm valves (ID valves) that enable the reversible and thermally stable actuation of multiple valves with unprecedented ease and robustness. These ID valves are configured from an elastic epoxy diaphragm embedded on a 3D printed push-and-twist valve, which can be easily actuated by a simple automatic driver unit.

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[59] Scientific Reports, 6, 30207, (2016)

Human breast cancer-derived soluble factors facilitate CCL19-induced chemotaxis of human dendritic cells

Hyundoo Hwang+, Changsik Shin+, Juhee Park1, Enoch Kang, Bongseo Choi, Jae-A Han, Yoonkyung Do, Seongho Ryu* and Yoon-Kyoung Cho*

Utilizing a unique 3D microfluidic device, we here showed that breast cancers (MCF-7, MDA-MB-231, MDA-MB-436 and SK-BR-3)-derived soluble factors increase the migration of DCs toward CCL19. This study demonstrated new possible evasion strategy of TNBCs utilizing their soluble factors that exploit the directionality of DCs toward chemokine responses, leading to the building of inflammatory milieu which may support their own growth.

Chemotaxis - Latest research and news | Nature
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[58] Lab Chip, 16, 17, 3268-3275, (2016)

Lab-on-a-Disc for Simultaneous Determination of Total Phenolic Content and Antioxidant Activity of Beverage Samples

Apichai Phonchai+, Yubin Kim+, Rattikan Chantiwas* and Yoon-Kyoung Cho*

This paper reports simultaneous determination of total phenolic contents(TPC) and antioxiant activity(AA) of beverages using lab-on-a-disc. The TPC and AA of 8 different beverage samples, including various fruit juices, tea, wine and beer, were analyzed. Unlike conventional labor-intensive processes for measuring TPC and AA, our fully automated platform offers one-step operation and rapid analysis.

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[57] J. Vis. Exp., 110, 54143, (2016)

Fully Automated Centrifugal Microfluidic Device for Ultrasensitive Protein Detection from Whole Blood

Yang-Seok Park, Vijaya Sunkara, Yubin Kim, Won Seok Lee, Ja-Ryoung Han, Yoon-Kyoung Cho*

This protocol demonstrates how to achieve femto molar detection sensitivity of proteins in 10 µL of whole blood within 30 min. This can be achieved by using electrospun nanofibrous mats integrated in a lab-on-a-disc, which offers high surface area as well as effective mixing and washing for enhanced signal-to-noise ratio.

Invited JOVE Paper

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